You can try cscan_logo as a complementary approach to analyze your data. ChIP-Seq data? Try our novel tool Pscan-ChIP.

Insert Gene/Sequence ID list: (help)

Jaspar 2018_NR
Jaspar 2018_R
Jaspar 2016
Jaspar_Fam
Transfac
User Defined

Upload File:

Sample data

List of Human NFkB target genes, collected from literature. NFkBxx indicates that xx percent of the genes in the list are NFkB targets, while the others are random genes added to the set to assess the performance of the algorithm.

NFkB100 NFkB90 NFkB80 NFkB70 NFkB60 NFkB50 NFkB40


List of Human NRF1 target genes. NRFxx should be read as in the NFkB dataset.

NRF1_100 NRF1_90 NRF1_80 NRF1_70 NRF1_60 NRF1_50 NRF1_40

NRF1 Matrix



Human tissue specific genes:

Liver